Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 AP001412.1-201ENST00000608405 714 ntBASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.77■□□□□ 0.59
LINC01555Q8NAE3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.77■□□□□ 0.59
LINC01555Q8NAE3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TSPY7P-201ENST00000431358 1114 ntBASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 CR392000.1-201ENST00000624770 1228 ntBASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 SLC25A24-204ENST00000569674 2357 ntBASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01555Q8NAE3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 KRT16P1-201ENST00000399124 1418 ntBASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 AC004980.1-204ENST00000429707 299 ntBASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LINC01555Q8NAE3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 MIR4497-201ENST00000583208 89 ntBASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01555Q8NAE3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 AC104417.2-201ENST00000562989 1793 ntBASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01555Q8NAE3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms