Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARHGEF39Q8N4T4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 AP003071.4-201ENST00000562276 1284 ntBASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 REXO1L12P-201ENST00000622156 912 ntBASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.41■□□□□ 0.54
ARHGEF39Q8N4T4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AL355075.4-201ENST00000554988 638 ntBASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AL031985.4-201ENST00000642138 673 ntBASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 KRT17P2-201ENST00000300992 1314 ntBASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGEF39Q8N4T4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.39■□□□□ 0.54
ARHGEF39Q8N4T4 LINC01465-201ENST00000408887 1940 ntBASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 AC011506.1-201ENST00000474329 610 ntBASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGEF39Q8N4T4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms