Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 VENTXP5-201ENST00000523979 775 ntBASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A3Q8N4M1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 KRT8P45-201ENST00000414328 1447 ntBASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC44A3Q8N4M1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SLC44A3Q8N4M1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.95■□□□□ 0.79
SLC44A3Q8N4M1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 CKBP1-201ENST00000565489 1086 ntBASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLC44A3Q8N4M1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 AF106564.1-201ENST00000607058 2553 ntBASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A3Q8N4M1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC44A3Q8N4M1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A3Q8N4M1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A3Q8N4M1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms