Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 PCDH8P1-201ENST00000428983 2773 ntBASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2BBQ8N257 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 FLJ38576-201ENST00000623820 2459 ntBASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2BBQ8N257 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 AIRN-201ENST00000601203 4374 ntBASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 AC108860.2-201ENST00000562760 2183 ntBASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 AL512353.2-201ENST00000448759 1962 ntBASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2BBQ8N257 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms