Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
SIX5Q8N196 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SIX5Q8N196 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX5Q8N196 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SIX5Q8N196 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SIX5Q8N196 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.93■□□□□ 0.78
SIX5Q8N196 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.93■□□□□ 0.78
SIX5Q8N196 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX5Q8N196 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX5Q8N196 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX5Q8N196 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX5Q8N196 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SIX5Q8N196 DPP3P2-201ENST00000416030 1696 ntBASIC19.92■□□□□ 0.78
SIX5Q8N196 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.92■□□□□ 0.78
SIX5Q8N196 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX5Q8N196 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX5Q8N196 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.92■□□□□ 0.78
SIX5Q8N196 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.92■□□□□ 0.78
SIX5Q8N196 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 AL136038.3-201ENST00000561909 1096 ntBASIC19.92■□□□□ 0.78
SIX5Q8N196 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX5Q8N196 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX5Q8N196 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX5Q8N196 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SIX5Q8N196 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
SIX5Q8N196 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 AL049796.1-201ENST00000565336 1766 ntBASIC19.91■□□□□ 0.78
SIX5Q8N196 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SIX5Q8N196 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX5Q8N196 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX5Q8N196 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
SIX5Q8N196 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX5Q8N196 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX5Q8N196 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX5Q8N196 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.91■□□□□ 0.78
SIX5Q8N196 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.91■□□□□ 0.78
SIX5Q8N196 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX5Q8N196 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX5Q8N196 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX5Q8N196 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX5Q8N196 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX5Q8N196 AC005229.4-201ENST00000610085 2198 ntBASIC19.91■□□□□ 0.78
SIX5Q8N196 Z98882.1-201ENST00000622160 2253 ntBASIC19.91■□□□□ 0.78
SIX5Q8N196 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 AC233723.2-201ENST00000623798 2106 ntBASIC19.9■□□□□ 0.78
SIX5Q8N196 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIX5Q8N196 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.9■□□□□ 0.78
SIX5Q8N196 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 Z85996.1-201ENST00000494644 937 ntBASIC19.9■□□□□ 0.78
SIX5Q8N196 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.9■□□□□ 0.78
SIX5Q8N196 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.9■□□□□ 0.78
SIX5Q8N196 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.9■□□□□ 0.78
SIX5Q8N196 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms