Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 MIR6786-201ENST00000616843 113 ntBASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN4BQ8IWT1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 AL390955.1-201ENST00000428694 934 ntBASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 AC011506.1-201ENST00000474329 610 ntBASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 AC026271.3-201ENST00000571884 352 ntBASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 LINC01023-201ENST00000606054 436 ntBASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 FSCN1P1-201ENST00000568912 1481 ntBASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SCN4BQ8IWT1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 B3GAT3P1-201ENST00000471720 806 ntBASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN4BQ8IWT1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SCN4BQ8IWT1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SCN4BQ8IWT1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN4BQ8IWT1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN4BQ8IWT1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 MESTP1-201ENST00000404287 994 ntBASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 LINC01465-201ENST00000408887 1940 ntBASIC20.51■□□□□ 0.87
SCN4BQ8IWT1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms