Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL23A1Q86Y22 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 AL022342.1-201ENST00000400363 863 ntBASIC24.52■■□□□ 1.52
COL23A1Q86Y22 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.52■■□□□ 1.52
COL23A1Q86Y22 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.52■■□□□ 1.52
COL23A1Q86Y22 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 EMBP1-201ENST00000458200 901 ntBASIC24.51■■□□□ 1.51
COL23A1Q86Y22 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 AC104692.2-201ENST00000603054 253 ntBASIC24.51■■□□□ 1.51
COL23A1Q86Y22 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.51■■□□□ 1.51
COL23A1Q86Y22 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 IFNL4P1-201ENST00000607083 540 ntBASIC24.5■■□□□ 1.51
COL23A1Q86Y22 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 AL031008.1-201ENST00000619963 541 ntBASIC24.5■■□□□ 1.51
COL23A1Q86Y22 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
COL23A1Q86Y22 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 AC011498.5-201ENST00000592027 486 ntBASIC24.49■■□□□ 1.51
COL23A1Q86Y22 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 BX119927.1-201ENST00000636596 1552 ntBASIC24.49■■□□□ 1.51
COL23A1Q86Y22 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL23A1Q86Y22 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL23A1Q86Y22 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms