Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC020763.4-201ENST00000623414 4170 ntBASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC239809.2-201ENST00000415381 517 ntBASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AL121906.2-201ENST00000621597 723 ntBASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC066615.1-201ENST00000640911 628 ntBASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP1BQ7LBR1 AC026471.1-201ENST00000564629 3026 ntBASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 AFG3L1P-217ENST00000557444 2447 ntBASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 AL359736.2-201ENST00000621992 437 ntBASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 GABARAPL3-202ENST00000624044 1851 ntBASIC17.9■□□□□ 0.46
CHMP1BQ7LBR1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP1BQ7LBR1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP1BQ7LBR1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.89■□□□□ 0.46
CHMP1BQ7LBR1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 AC233263.1-201ENST00000578059 224 ntBASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 AL023875.1-201ENST00000640777 796 ntBASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP1BQ7LBR1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 MTDHP1-201ENST00000605323 784 ntBASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 AL121829.2-201ENST00000620908 328 ntBASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms