Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 AC026396.1-201ENST00000419388 421 ntBASIC21■□□□□ 0.95
CNKSR3Q6P9H4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 NEK4P2-201ENST00000580004 1012 ntBASIC21■□□□□ 0.95
CNKSR3Q6P9H4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 ZNF444P1-201ENST00000559497 298 ntBASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 AC083849.1-201ENST00000615227 514 ntBASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR3Q6P9H4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 STARP1-201ENST00000397973 869 ntBASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR3Q6P9H4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR3Q6P9H4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms