Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 UBE2SP1-201ENST00000450587 669 ntBASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC098590.1-201ENST00000468126 897 ntBASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA1Q5Y7H0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA1Q5Y7H0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.14■□□□□ 0.5
HLA-DQA1Q5Y7H0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
HLA-DQA1Q5Y7H0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HLA-DQA1Q5Y7H0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 KRT18P16-201ENST00000510337 1294 ntBASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms