Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
SNAPC4Q5SXM2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.95■■■□□ 2.71
SNAPC4Q5SXM2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
SNAPC4Q5SXM2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SNAPC4Q5SXM2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
SNAPC4Q5SXM2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 AL121672.3-201ENST00000608644 468 ntBASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 BX119927.1-201ENST00000636596 1552 ntBASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
SNAPC4Q5SXM2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 AP002414.4-201ENST00000589764 1148 ntBASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
SNAPC4Q5SXM2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 RASA4DP-201ENST00000460726 1199 ntBASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 AC106795.1-205ENST00000512851 1056 ntBASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SNAPC4Q5SXM2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
SNAPC4Q5SXM2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 TSPY19P-201ENST00000418461 509 ntBASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 TSPY18P-201ENST00000441642 509 ntBASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 BX276092.5-203ENST00000456199 560 ntBASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
SNAPC4Q5SXM2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SNAPC4Q5SXM2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SNAPC4Q5SXM2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
SNAPC4Q5SXM2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SNAPC4Q5SXM2 NUS1P1-201ENST00000446295 882 ntBASIC31.89■■■□□ 2.7
SNAPC4Q5SXM2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 TSPY12P-201ENST00000421279 868 ntBASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 AL160237.2-201ENST00000556165 472 ntBASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 AC011498.5-201ENST00000592027 486 ntBASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms