Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 BX088651.1-201ENST00000540551 451 ntBASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39AQ5SRH9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.7■■□□□ 1.39
TTC39AQ5SRH9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TTC39AQ5SRH9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TTC39AQ5SRH9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 AC116562.2-201ENST00000507042 360 ntBASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 LINC01465-201ENST00000408887 1940 ntBASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC39AQ5SRH9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 AC026271.3-201ENST00000571884 352 ntBASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39AQ5SRH9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 RBM17P1-201ENST00000453646 1190 ntBASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 MIR6786-201ENST00000616843 113 ntBASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39AQ5SRH9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms