Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 AL390719.1-204ENST00000412397 1219 ntBASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 AF201337.1-201ENST00000520239 748 ntBASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ATP6AP1LQ52LC2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 TFP1-202ENST00000475455 1573 ntBASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 AC105036.2-201ENST00000569468 176 ntBASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ATP6AP1LQ52LC2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 BX276092.2-201ENST00000417668 665 ntBASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 AC080038.1-201ENST00000611274 1154 ntBASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP6AP1LQ52LC2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
ATP6AP1LQ52LC2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ATP6AP1LQ52LC2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP6AP1LQ52LC2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.77■□□□□ 0.59
ATP6AP1LQ52LC2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.77■□□□□ 0.59
ATP6AP1LQ52LC2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms