Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AL121906.2-201ENST00000621597 723 ntBASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 AC004408.2-201ENST00000623613 2777 ntBASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 AL020996.1-203ENST00000536896 2307 ntBASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP13A4Q4VNC1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 UNC93B5-201ENST00000530315 699 ntBASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 AL121829.2-201ENST00000620908 328 ntBASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATP13A4Q4VNC1 ZNF815P-204ENST00000434898 1737 ntBASIC20.27■□□□□ 0.83
ATP13A4Q4VNC1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP13A4Q4VNC1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATP13A4Q4VNC1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 TNXA-203ENST00000507684 2038 ntBASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP13A4Q4VNC1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 TEX21P-204ENST00000641479 1693 ntBASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATP13A4Q4VNC1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms