Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.28■■□□□ 1
TRIM71Q2Q1W2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 FAM86EP-206ENST00000510506 987 ntBASIC21.27■■□□□ 1
TRIM71Q2Q1W2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 AL441883.1-201ENST00000566170 1045 ntBASIC21.27■■□□□ 1
TRIM71Q2Q1W2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.27■■□□□ 1
TRIM71Q2Q1W2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM71Q2Q1W2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.27■□□□□ 0.99
TRIM71Q2Q1W2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 AC020907.5-201ENST00000624372 1936 ntBASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 AC092647.4-201ENST00000457211 535 ntBASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 AP000550.4-202ENST00000639755 178 ntBASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM71Q2Q1W2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 AP003041.3-201ENST00000527151 707 ntBASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 AL023973.1-201ENST00000624619 620 ntBASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 AL121956.5-201ENST00000625261 221 ntBASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM71Q2Q1W2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 AL512604.3-201ENST00000569583 964 ntBASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM71Q2Q1W2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 AC009947.2-201ENST00000444014 672 ntBASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 HOMER2P1-201ENST00000455653 964 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms