Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.76■■□□□ 1.23
SHROOM1Q2M3G4 ATP5G1P1-201ENST00000448724 379 ntBASIC22.76■■□□□ 1.23
SHROOM1Q2M3G4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.76■■□□□ 1.23
SHROOM1Q2M3G4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.76■■□□□ 1.23
SHROOM1Q2M3G4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHROOM1Q2M3G4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 AC117947.1-201ENST00000427448 529 ntBASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 LIN28AP1-201ENST00000429574 405 ntBASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 AC007663.1-201ENST00000438948 1240 ntBASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 AL023803.3-201ENST00000615559 522 ntBASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 AL138966.2-201ENST00000621997 464 ntBASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SHROOM1Q2M3G4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 AC009237.14-201ENST00000609975 1594 ntBASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 AC092338.2-201ENST00000568827 1415 ntBASIC22.74■■□□□ 1.23
SHROOM1Q2M3G4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 AC139887.4-201ENST00000607877 719 ntBASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 CLDN5-201ENST00000403084 2357 ntBASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SHROOM1Q2M3G4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
SHROOM1Q2M3G4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 AC128688.1-201ENST00000487626 519 ntBASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
SHROOM1Q2M3G4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SHROOM1Q2M3G4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms