Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
CFHR3Q02985 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CFHR3Q02985 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.23■□□□□ 0.03
CFHR3Q02985 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 MIR4785-201ENST00000585005 73 ntBASIC15.23■□□□□ 0.03
CFHR3Q02985 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.23■□□□□ 0.03
CFHR3Q02985 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CFHR3Q02985 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CFHR3Q02985 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CFHR3Q02985 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CFHR3Q02985 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.22■□□□□ 0.03
CFHR3Q02985 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 AC026271.3-201ENST00000571884 352 ntBASIC15.22■□□□□ 0.03
CFHR3Q02985 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.22■□□□□ 0.03
CFHR3Q02985 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 AC026471.5-201ENST00000615068 467 ntBASIC15.22■□□□□ 0.03
CFHR3Q02985 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.22■□□□□ 0.03
CFHR3Q02985 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CFHR3Q02985 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CFHR3Q02985 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CFHR3Q02985 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.21■□□□□ 0.03
CFHR3Q02985 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.21■□□□□ 0.03
CFHR3Q02985 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.21■□□□□ 0.03
CFHR3Q02985 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 AC004980.1-204ENST00000429707 299 ntBASIC15.21■□□□□ 0.03
CFHR3Q02985 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.21■□□□□ 0.03
CFHR3Q02985 CR392000.1-201ENST00000624770 1228 ntBASIC15.21■□□□□ 0.03
CFHR3Q02985 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CFHR3Q02985 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.21■□□□□ 0.03
CFHR3Q02985 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFHR3Q02985 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFHR3Q02985 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CFHR3Q02985 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CFHR3Q02985 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFHR3Q02985 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFHR3Q02985 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.2■□□□□ 0.02
CFHR3Q02985 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms