Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAD23BP54727 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RAD23BP54727 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.81■□□□□ 0.92
RAD23BP54727 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD23BP54727 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAD23BP54727 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD23BP54727 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.8■□□□□ 0.92
RAD23BP54727 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.8■□□□□ 0.92
RAD23BP54727 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.8■□□□□ 0.92
RAD23BP54727 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.8■□□□□ 0.92
RAD23BP54727 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD23BP54727 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 FAM197Y4-202ENST00000622692 608 ntBASIC20.8■□□□□ 0.92
RAD23BP54727 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAD23BP54727 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
RAD23BP54727 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAD23BP54727 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 KRT8P8-201ENST00000434750 1448 ntBASIC20.79■□□□□ 0.92
RAD23BP54727 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAD23BP54727 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.79■□□□□ 0.92
RAD23BP54727 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.79■□□□□ 0.92
RAD23BP54727 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
RAD23BP54727 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAD23BP54727 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
RAD23BP54727 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAD23BP54727 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAD23BP54727 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAD23BP54727 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RAD23BP54727 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.78■□□□□ 0.92
RAD23BP54727 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.78■□□□□ 0.92
RAD23BP54727 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.78■□□□□ 0.92
RAD23BP54727 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RAD23BP54727 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAD23BP54727 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.77■□□□□ 0.92
RAD23BP54727 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RAD23BP54727 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAD23BP54727 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.77■□□□□ 0.92
RAD23BP54727 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms