Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 PHGDH-210ENST00000641115 1638 ntBASIC20.06■□□□□ 0.8
PMS2P54278 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.06■□□□□ 0.8
PMS2P54278 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.06■□□□□ 0.8
PMS2P54278 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 AL050303.2-201ENST00000619798 666 ntBASIC20.06■□□□□ 0.8
PMS2P54278 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 TMEM191A-211ENST00000637163 1067 ntBASIC20.06■□□□□ 0.8
PMS2P54278 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PMS2P54278 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PMS2P54278 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PMS2P54278 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.06■□□□□ 0.8
PMS2P54278 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS2P54278 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS2P54278 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 AC104581.1-202ENST00000635932 2618 ntBASIC20.05■□□□□ 0.8
PMS2P54278 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.05■□□□□ 0.8
PMS2P54278 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.05■□□□□ 0.8
PMS2P54278 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 AL591742.1-201ENST00000604433 565 ntBASIC20.05■□□□□ 0.8
PMS2P54278 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS2P54278 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS2P54278 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS2P54278 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PMS2P54278 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PMS2P54278 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.04■□□□□ 0.8
PMS2P54278 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.04■□□□□ 0.8
PMS2P54278 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 AC007322.1-201ENST00000426983 750 ntBASIC20.04■□□□□ 0.8
PMS2P54278 TSPY6P-201ENST00000448518 926 ntBASIC20.04■□□□□ 0.8
PMS2P54278 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 AC083906.2-201ENST00000511578 360 ntBASIC20.04■□□□□ 0.8
PMS2P54278 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 AC005181.1-201ENST00000604782 1256 ntBASIC20.04■□□□□ 0.8
PMS2P54278 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.04■□□□□ 0.8
PMS2P54278 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.04■□□□□ 0.8
PMS2P54278 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS2P54278 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS2P54278 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PMS2P54278 AC020763.4-201ENST00000623414 4170 ntBASIC20.03■□□□□ 0.8
PMS2P54278 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PMS2P54278 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS2P54278 AC006333.2-201ENST00000607957 2099 ntBASIC20.03■□□□□ 0.8
PMS2P54278 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PMS2P54278 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms