Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
ACLYP53396 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.52■■□□□ 1.04
ACLYP53396 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.52■■□□□ 1.04
ACLYP53396 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.52■■□□□ 1.04
ACLYP53396 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.52■■□□□ 1.04
ACLYP53396 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.52■■□□□ 1.04
ACLYP53396 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.52■■□□□ 1.04
ACLYP53396 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ACLYP53396 AC079834.2-201ENST00000609776 1949 ntBASIC21.51■■□□□ 1.03
ACLYP53396 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.51■■□□□ 1.03
ACLYP53396 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.51■■□□□ 1.03
ACLYP53396 AC112907.2-201ENST00000448639 330 ntBASIC21.51■■□□□ 1.03
ACLYP53396 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.51■■□□□ 1.03
ACLYP53396 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.51■■□□□ 1.03
ACLYP53396 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ACLYP53396 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACLYP53396 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 AP001271.2-201ENST00000624018 1556 ntBASIC21.5■■□□□ 1.03
ACLYP53396 AP000523.1-201ENST00000398242 1049 ntBASIC21.5■■□□□ 1.03
ACLYP53396 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.5■■□□□ 1.03
ACLYP53396 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.5■■□□□ 1.03
ACLYP53396 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.5■■□□□ 1.03
ACLYP53396 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.5■■□□□ 1.03
ACLYP53396 ZNF444P1-201ENST00000559497 298 ntBASIC21.5■■□□□ 1.03
ACLYP53396 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.5■■□□□ 1.03
ACLYP53396 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
ACLYP53396 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.5■■□□□ 1.03
ACLYP53396 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ACLYP53396 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.5■■□□□ 1.03
ACLYP53396 AC083849.1-201ENST00000615227 514 ntBASIC21.5■■□□□ 1.03
ACLYP53396 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.5■■□□□ 1.03
ACLYP53396 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ACLYP53396 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.5■■□□□ 1.03
ACLYP53396 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACLYP53396 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.5■■□□□ 1.03
ACLYP53396 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.49■■□□□ 1.03
ACLYP53396 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
ACLYP53396 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.49■■□□□ 1.03
ACLYP53396 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.49■■□□□ 1.03
ACLYP53396 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.49■■□□□ 1.03
ACLYP53396 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.49■■□□□ 1.03
ACLYP53396 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.49■■□□□ 1.03
ACLYP53396 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
ACLYP53396 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.49■■□□□ 1.03
ACLYP53396 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.49■■□□□ 1.03
ACLYP53396 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ACLYP53396 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ACLYP53396 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
ACLYP53396 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ACLYP53396 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ACLYP53396 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACLYP53396 AC012676.1-201ENST00000574705 1949 ntBASIC21.49■■□□□ 1.03
ACLYP53396 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ACLYP53396 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ACLYP53396 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.48■■□□□ 1.03
ACLYP53396 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ACLYP53396 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ACLYP53396 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.48■■□□□ 1.03
ACLYP53396 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.48■■□□□ 1.03
ACLYP53396 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ACLYP53396 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ACLYP53396 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.48■■□□□ 1.03
ACLYP53396 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.48■■□□□ 1.03
ACLYP53396 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.48■■□□□ 1.03
ACLYP53396 HYMAI.1-201ENST00000620949 238 ntBASIC21.48■■□□□ 1.03
ACLYP53396 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.48■■□□□ 1.03
ACLYP53396 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.48■■□□□ 1.03
ACLYP53396 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.48■■□□□ 1.03
ACLYP53396 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.47■■□□□ 1.03
ACLYP53396 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.47■■□□□ 1.03
ACLYP53396 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ACLYP53396 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.47■■□□□ 1.03
ACLYP53396 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ACLYP53396 NEK4P2-201ENST00000580004 1012 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms