Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 TEX21P-204ENST00000641479 1693 ntBASIC18.61■□□□□ 0.57
POLR2JP52435 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLR2JP52435 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 AL512625.2-201ENST00000417533 625 ntBASIC18.61■□□□□ 0.57
POLR2JP52435 AC093787.1-201ENST00000450396 207 ntBASIC18.61■□□□□ 0.57
POLR2JP52435 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR2JP52435 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR2JP52435 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR2JP52435 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR2JP52435 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR2JP52435 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.6■□□□□ 0.57
POLR2JP52435 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.6■□□□□ 0.57
POLR2JP52435 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR2JP52435 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR2JP52435 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR2JP52435 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2JP52435 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2JP52435 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR2JP52435 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2JP52435 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.59■□□□□ 0.57
POLR2JP52435 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2JP52435 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 TFP1-202ENST00000475455 1573 ntBASIC18.59■□□□□ 0.57
POLR2JP52435 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
POLR2JP52435 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2JP52435 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.58■□□□□ 0.57
POLR2JP52435 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
POLR2JP52435 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
POLR2JP52435 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2JP52435 AC006333.2-201ENST00000607957 2099 ntBASIC18.58■□□□□ 0.57
POLR2JP52435 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 GPX1P1-201ENST00000388829 606 ntBASIC18.58■□□□□ 0.56
POLR2JP52435 LSM12P1-201ENST00000411836 588 ntBASIC18.58■□□□□ 0.56
POLR2JP52435 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR2JP52435 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR2JP52435 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR2JP52435 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR2JP52435 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
POLR2JP52435 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms