Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.24■□□□□ 0.99
CDR1P51861 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.24■□□□□ 0.99
CDR1P51861 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDR1P51861 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.24■□□□□ 0.99
CDR1P51861 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.24■□□□□ 0.99
CDR1P51861 AC124016.1-201ENST00000609552 612 ntBASIC21.24■□□□□ 0.99
CDR1P51861 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.24■□□□□ 0.99
CDR1P51861 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.24■□□□□ 0.99
CDR1P51861 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDR1P51861 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CDR1P51861 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.23■□□□□ 0.99
CDR1P51861 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDR1P51861 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 AC239809.2-201ENST00000415381 517 ntBASIC21.23■□□□□ 0.99
CDR1P51861 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.23■□□□□ 0.99
CDR1P51861 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.23■□□□□ 0.99
CDR1P51861 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.23■□□□□ 0.99
CDR1P51861 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CDR1P51861 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.23■□□□□ 0.99
CDR1P51861 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDR1P51861 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.23■□□□□ 0.99
CDR1P51861 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CDR1P51861 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.22■□□□□ 0.99
CDR1P51861 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDR1P51861 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 AC112907.3-201ENST00000577781 2400 ntBASIC21.22■□□□□ 0.99
CDR1P51861 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CDR1P51861 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.22■□□□□ 0.99
CDR1P51861 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.22■□□□□ 0.99
CDR1P51861 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.22■□□□□ 0.99
CDR1P51861 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.22■□□□□ 0.99
CDR1P51861 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDR1P51861 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDR1P51861 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDR1P51861 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDR1P51861 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDR1P51861 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDR1P51861 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CDR1P51861 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 UBE2SP1-201ENST00000450587 669 ntBASIC21.21■□□□□ 0.99
CDR1P51861 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CDR1P51861 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.21■□□□□ 0.99
CDR1P51861 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.21■□□□□ 0.99
CDR1P51861 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDR1P51861 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.21■□□□□ 0.99
CDR1P51861 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms