Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1DP48730 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1DP48730 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1DP48730 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1DP48730 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1DP48730 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1DP48730 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1DP48730 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 TSPY7P-201ENST00000431358 1114 ntBASIC19.58■□□□□ 0.72
CSNK1DP48730 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1DP48730 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1DP48730 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1DP48730 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.58■□□□□ 0.72
CSNK1DP48730 ZNF815P-204ENST00000434898 1737 ntBASIC19.58■□□□□ 0.72
CSNK1DP48730 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CSNK1DP48730 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.58■□□□□ 0.72
CSNK1DP48730 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1DP48730 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.57■□□□□ 0.72
CSNK1DP48730 AL355355.2-201ENST00000442321 338 ntBASIC19.57■□□□□ 0.72
CSNK1DP48730 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.57■□□□□ 0.72
CSNK1DP48730 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1DP48730 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CSNK1DP48730 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1DP48730 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1DP48730 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.56■□□□□ 0.72
CSNK1DP48730 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
CSNK1DP48730 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1DP48730 AC104417.2-201ENST00000562989 1793 ntBASIC19.56■□□□□ 0.72
CSNK1DP48730 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CSNK1DP48730 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1DP48730 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1DP48730 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1DP48730 FSCN1P1-201ENST00000568912 1481 ntBASIC19.55■□□□□ 0.72
CSNK1DP48730 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1DP48730 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1DP48730 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1DP48730 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.55■□□□□ 0.72
CSNK1DP48730 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1DP48730 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CSNK1DP48730 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.55■□□□□ 0.72
CSNK1DP48730 AP003071.4-201ENST00000562276 1284 ntBASIC19.55■□□□□ 0.72
CSNK1DP48730 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1DP48730 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1DP48730 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1DP48730 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1DP48730 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.55■□□□□ 0.72
CSNK1DP48730 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CSNK1DP48730 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CSNK1DP48730 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CSNK1DP48730 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CSNK1DP48730 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1DP48730 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.54■□□□□ 0.72
CSNK1DP48730 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.54■□□□□ 0.72
CSNK1DP48730 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.54■□□□□ 0.72
CSNK1DP48730 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.54■□□□□ 0.72
CSNK1DP48730 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.54■□□□□ 0.72
CSNK1DP48730 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.54■□□□□ 0.72
CSNK1DP48730 MIR6786-201ENST00000616843 113 ntBASIC19.54■□□□□ 0.72
CSNK1DP48730 AC130371.2-201ENST00000619443 611 ntBASIC19.54■□□□□ 0.72
CSNK1DP48730 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1DP48730 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1DP48730 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CSNK1DP48730 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1DP48730 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms