Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN9P43378 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN9P43378 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTPN9P43378 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
PTPN9P43378 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PTPN9P43378 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN9P43378 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN9P43378 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN9P43378 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 ABHD17AP1-201ENST00000358206 933 ntBASIC20.25■□□□□ 0.83
PTPN9P43378 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN9P43378 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN9P43378 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTPN9P43378 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN9P43378 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN9P43378 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN9P43378 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN9P43378 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTPN9P43378 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN9P43378 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 AC007952.6-201ENST00000573168 2673 ntBASIC20.24■□□□□ 0.83
PTPN9P43378 AC003957.1-201ENST00000625108 2673 ntBASIC20.24■□□□□ 0.83
PTPN9P43378 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTPN9P43378 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN9P43378 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN9P43378 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN9P43378 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PTPN9P43378 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN9P43378 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.24■□□□□ 0.83
PTPN9P43378 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN9P43378 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN9P43378 AL359736.2-201ENST00000621992 437 ntBASIC20.24■□□□□ 0.83
PTPN9P43378 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTPN9P43378 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN9P43378 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN9P43378 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN9P43378 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PTPN9P43378 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN9P43378 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN9P43378 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 HLA-A-209ENST00000638375 975 ntBASIC20.23■□□□□ 0.83
PTPN9P43378 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN9P43378 RNF165-205ENST00000588679 2904 ntBASIC20.23■□□□□ 0.83
PTPN9P43378 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN9P43378 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN9P43378 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN9P43378 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN9P43378 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN9P43378 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PTPN9P43378 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN9P43378 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN9P43378 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN9P43378 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.22■□□□□ 0.83
PTPN9P43378 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN9P43378 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN9P43378 AL032819.2-201ENST00000624543 2162 ntBASIC20.22■□□□□ 0.83
PTPN9P43378 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN9P43378 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms