Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TSPY6P-201ENST00000448518 926 ntBASIC20.65■□□□□ 0.9
SSR1P43307 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR1P43307 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR1P43307 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SSR1P43307 AC006557.6-201ENST00000623071 864 ntBASIC20.65■□□□□ 0.9
SSR1P43307 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSR1P43307 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSR1P43307 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSR1P43307 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SSR1P43307 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.64■□□□□ 0.9
SSR1P43307 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSR1P43307 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.64■□□□□ 0.9
SSR1P43307 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SSR1P43307 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.64■□□□□ 0.89
SSR1P43307 AC092118.2-201ENST00000613495 667 ntBASIC20.64■□□□□ 0.89
SSR1P43307 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SSR1P43307 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
SSR1P43307 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR1P43307 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSR1P43307 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.63■□□□□ 0.89
SSR1P43307 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SSR1P43307 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.63■□□□□ 0.89
SSR1P43307 AC091874.3-201ENST00000512672 1195 ntBASIC20.63■□□□□ 0.89
SSR1P43307 MIR4758-201ENST00000577688 71 ntBASIC20.63■□□□□ 0.89
SSR1P43307 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR1P43307 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.63■□□□□ 0.89
SSR1P43307 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SSR1P43307 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR1P43307 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SSR1P43307 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.62■□□□□ 0.89
SSR1P43307 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR1P43307 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SSR1P43307 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.62■□□□□ 0.89
SSR1P43307 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SSR1P43307 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SSR1P43307 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.62■□□□□ 0.89
SSR1P43307 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR1P43307 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSR1P43307 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR1P43307 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.61■□□□□ 0.89
SSR1P43307 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms