Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX3P41225 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX3P41225 AC133681.1-201ENST00000465482 601 ntBASIC18.3■□□□□ 0.52
SOX3P41225 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX3P41225 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.3■□□□□ 0.52
SOX3P41225 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX3P41225 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX3P41225 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SOX3P41225 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX3P41225 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX3P41225 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX3P41225 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX3P41225 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX3P41225 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX3P41225 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX3P41225 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX3P41225 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.29■□□□□ 0.52
SOX3P41225 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX3P41225 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX3P41225 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.28■□□□□ 0.52
SOX3P41225 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SOX3P41225 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.28■□□□□ 0.52
SOX3P41225 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SOX3P41225 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.28■□□□□ 0.52
SOX3P41225 AC110285.5-201ENST00000611501 352 ntBASIC18.28■□□□□ 0.52
SOX3P41225 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX3P41225 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SOX3P41225 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX3P41225 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX3P41225 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX3P41225 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SOX3P41225 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SOX3P41225 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX3P41225 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX3P41225 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SOX3P41225 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX3P41225 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX3P41225 AC008550.1-201ENST00000511500 884 ntBASIC18.27■□□□□ 0.52
SOX3P41225 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX3P41225 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX3P41225 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX3P41225 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SOX3P41225 AC004408.2-201ENST00000623613 2777 ntBASIC18.27■□□□□ 0.51
SOX3P41225 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.51
SOX3P41225 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.27■□□□□ 0.51
SOX3P41225 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX3P41225 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX3P41225 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX3P41225 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.26■□□□□ 0.51
SOX3P41225 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms