Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.89■□□□□ 0.13
CEACAM3P40198 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CEACAM3P40198 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CEACAM3P40198 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.89■□□□□ 0.13
CEACAM3P40198 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CEACAM3P40198 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CEACAM3P40198 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CEACAM3P40198 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.88■□□□□ 0.13
CEACAM3P40198 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.88■□□□□ 0.13
CEACAM3P40198 TMEM191A-211ENST00000637163 1067 ntBASIC15.88■□□□□ 0.13
CEACAM3P40198 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.88■□□□□ 0.13
CEACAM3P40198 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.88■□□□□ 0.13
CEACAM3P40198 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
CEACAM3P40198 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CEACAM3P40198 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CEACAM3P40198 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CEACAM3P40198 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CEACAM3P40198 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.87■□□□□ 0.13
CEACAM3P40198 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.87■□□□□ 0.13
CEACAM3P40198 KRT16P5-201ENST00000455284 522 ntBASIC15.87■□□□□ 0.13
CEACAM3P40198 KRT18P16-201ENST00000510337 1294 ntBASIC15.87■□□□□ 0.13
CEACAM3P40198 RPPH1-201ENST00000516869 333 ntBASIC15.87■□□□□ 0.13
CEACAM3P40198 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 AC124016.1-201ENST00000609552 612 ntBASIC15.87■□□□□ 0.13
CEACAM3P40198 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.87■□□□□ 0.13
CEACAM3P40198 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.87■□□□□ 0.13
CEACAM3P40198 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CEACAM3P40198 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.86■□□□□ 0.13
CEACAM3P40198 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CEACAM3P40198 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CEACAM3P40198 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CEACAM3P40198 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CEACAM3P40198 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.86■□□□□ 0.13
CEACAM3P40198 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.86■□□□□ 0.13
CEACAM3P40198 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 AC142381.4-202ENST00000563973 229 ntBASIC15.86■□□□□ 0.13
CEACAM3P40198 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.86■□□□□ 0.13
CEACAM3P40198 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.86■□□□□ 0.13
CEACAM3P40198 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.86■□□□□ 0.13
CEACAM3P40198 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.86■□□□□ 0.13
CEACAM3P40198 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CEACAM3P40198 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CEACAM3P40198 KRT8P8-201ENST00000434750 1448 ntBASIC15.85■□□□□ 0.13
CEACAM3P40198 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CEACAM3P40198 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CEACAM3P40198 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CEACAM3P40198 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CEACAM3P40198 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
CEACAM3P40198 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms