Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
KRT9P35527 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.27■■□□□ 1
KRT9P35527 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.27■■□□□ 1
KRT9P35527 DUSP5P2-201ENST00000426873 1033 ntBASIC21.27■■□□□ 1
KRT9P35527 MIR4758-201ENST00000577688 71 ntBASIC21.27■■□□□ 1
KRT9P35527 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.27■■□□□ 1
KRT9P35527 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.27■■□□□ 1
KRT9P35527 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.27■■□□□ 1
KRT9P35527 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
KRT9P35527 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.27■■□□□ 1
KRT9P35527 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KRT9P35527 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
KRT9P35527 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.27■■□□□ 1
KRT9P35527 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KRT9P35527 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT9P35527 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.27■■□□□ 1
KRT9P35527 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.27■□□□□ 0.99
KRT9P35527 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.27■□□□□ 0.99
KRT9P35527 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.26■□□□□ 0.99
KRT9P35527 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT9P35527 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT9P35527 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.26■□□□□ 0.99
KRT9P35527 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.26■□□□□ 0.99
KRT9P35527 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KRT9P35527 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT9P35527 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT9P35527 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT9P35527 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT9P35527 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT9P35527 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT9P35527 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.25■□□□□ 0.99
KRT9P35527 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KRT9P35527 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT9P35527 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT9P35527 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 AL109923.1-201ENST00000618799 583 ntBASIC21.25■□□□□ 0.99
KRT9P35527 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
KRT9P35527 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT9P35527 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT9P35527 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT9P35527 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT9P35527 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
KRT9P35527 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 NEFHP1-201ENST00000412845 2629 ntBASIC21.24■□□□□ 0.99
KRT9P35527 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
KRT9P35527 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT9P35527 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT9P35527 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT9P35527 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT9P35527 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT9P35527 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT9P35527 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT9P35527 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
KRT9P35527 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms