Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL1P22362 AL138781.2-201ENST00000617896 1843 ntBASIC16.77■□□□□ 0.27
CCL1P22362 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL1P22362 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL1P22362 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL1P22362 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL1P22362 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL1P22362 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 CROCCP3-202ENST00000420820 1947 ntBASIC16.76■□□□□ 0.27
CCL1P22362 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL1P22362 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL1P22362 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL1P22362 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCL1P22362 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL1P22362 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCL1P22362 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL1P22362 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL1P22362 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CCL1P22362 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL1P22362 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.76■□□□□ 0.27
CCL1P22362 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL1P22362 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CCL1P22362 KRT18P16-201ENST00000510337 1294 ntBASIC16.76■□□□□ 0.27
CCL1P22362 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL1P22362 AC120498.8-201ENST00000614275 531 ntBASIC16.76■□□□□ 0.27
CCL1P22362 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL1P22362 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL1P22362 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CCL1P22362 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCL1P22362 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 MIR935-201ENST00000401179 91 ntBASIC16.75■□□□□ 0.27
CCL1P22362 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCL1P22362 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL1P22362 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL1P22362 AC083880.1-201ENST00000608266 535 ntBASIC16.75■□□□□ 0.27
CCL1P22362 AL121829.2-201ENST00000620908 328 ntBASIC16.75■□□□□ 0.27
CCL1P22362 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 SDHAP1-207ENST00000440850 2000 ntBASIC16.75■□□□□ 0.27
CCL1P22362 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL1P22362 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 RNF165-205ENST00000588679 2904 ntBASIC16.75■□□□□ 0.27
CCL1P22362 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL1P22362 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL1P22362 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CCL1P22362 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL1P22362 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.74■□□□□ 0.27
CCL1P22362 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL1P22362 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CCL1P22362 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL1P22362 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCL1P22362 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
CCL1P22362 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL1P22362 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL1P22362 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.73■□□□□ 0.27
CCL1P22362 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms