Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT4P19013 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT4P19013 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
KRT4P19013 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
KRT4P19013 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.52■□□□□ 0.71
KRT4P19013 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 AC023632.3-201ENST00000521633 145 ntBASIC19.51■□□□□ 0.71
KRT4P19013 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
KRT4P19013 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.51■□□□□ 0.71
KRT4P19013 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 LETM1P2-201ENST00000597330 2178 ntBASIC19.51■□□□□ 0.71
KRT4P19013 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT4P19013 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT4P19013 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT4P19013 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT4P19013 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 MIR638-201ENST00000385237 100 ntBASIC19.5■□□□□ 0.71
KRT4P19013 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.5■□□□□ 0.71
KRT4P19013 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT4P19013 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
KRT4P19013 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
KRT4P19013 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT4P19013 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
KRT4P19013 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT4P19013 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT4P19013 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT4P19013 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT4P19013 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRT4P19013 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT4P19013 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.49■□□□□ 0.71
KRT4P19013 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT4P19013 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
KRT4P19013 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.49■□□□□ 0.71
KRT4P19013 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRT4P19013 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT4P19013 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT4P19013 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms