Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.54■□□□□ 0.72
VCLP18206 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VCLP18206 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VCLP18206 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.54■□□□□ 0.72
VCLP18206 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.54■□□□□ 0.72
VCLP18206 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VCLP18206 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.54■□□□□ 0.72
VCLP18206 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
VCLP18206 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.54■□□□□ 0.72
VCLP18206 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCLP18206 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.53■□□□□ 0.72
VCLP18206 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.53■□□□□ 0.72
VCLP18206 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.53■□□□□ 0.72
VCLP18206 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.53■□□□□ 0.72
VCLP18206 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.53■□□□□ 0.72
VCLP18206 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
VCLP18206 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
VCLP18206 C1QBPP2-201ENST00000528754 825 ntBASIC19.53■□□□□ 0.72
VCLP18206 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.53■□□□□ 0.72
VCLP18206 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 AC142381.4-202ENST00000563973 229 ntBASIC19.53■□□□□ 0.72
VCLP18206 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.53■□□□□ 0.72
VCLP18206 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 FAM197Y4-202ENST00000622692 608 ntBASIC19.53■□□□□ 0.72
VCLP18206 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.53■□□□□ 0.72
VCLP18206 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.53■□□□□ 0.72
VCLP18206 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCLP18206 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.52■□□□□ 0.72
VCLP18206 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.52■□□□□ 0.72
VCLP18206 AC239809.2-201ENST00000415381 517 ntBASIC19.52■□□□□ 0.72
VCLP18206 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VCLP18206 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VCLP18206 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.52■□□□□ 0.72
VCLP18206 AC233263.1-201ENST00000578059 224 ntBASIC19.52■□□□□ 0.72
VCLP18206 MTDHP1-201ENST00000605323 784 ntBASIC19.52■□□□□ 0.72
VCLP18206 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.52■□□□□ 0.72
VCLP18206 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.52■□□□□ 0.72
VCLP18206 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.52■□□□□ 0.72
VCLP18206 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
VCLP18206 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VCLP18206 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.52■□□□□ 0.71
VCLP18206 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VCLP18206 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.51■□□□□ 0.71
VCLP18206 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 AL158047.1-201ENST00000445918 881 ntBASIC19.51■□□□□ 0.71
VCLP18206 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.51■□□□□ 0.71
VCLP18206 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms