Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRKCAP17252 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRKCAP17252 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.99■□□□□ 0.47
PRKCAP17252 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRKCAP17252 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.98■□□□□ 0.47
PRKCAP17252 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
PRKCAP17252 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 AP003097.1-201ENST00000530657 1135 ntBASIC17.98■□□□□ 0.47
PRKCAP17252 AC008403.3-201ENST00000598924 454 ntBASIC17.98■□□□□ 0.47
PRKCAP17252 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.98■□□□□ 0.47
PRKCAP17252 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.98■□□□□ 0.47
PRKCAP17252 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKCAP17252 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKCAP17252 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 AP001271.2-201ENST00000624018 1556 ntBASIC17.97■□□□□ 0.47
PRKCAP17252 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.97■□□□□ 0.47
PRKCAP17252 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.97■□□□□ 0.47
PRKCAP17252 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.97■□□□□ 0.47
PRKCAP17252 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.97■□□□□ 0.47
PRKCAP17252 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 TMEM179-206ENST00000616017 1645 ntBASIC17.97■□□□□ 0.47
PRKCAP17252 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKCAP17252 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRKCAP17252 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRKCAP17252 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 AC116351.2-201ENST00000606540 1585 ntBASIC17.96■□□□□ 0.47
PRKCAP17252 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRKCAP17252 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRKCAP17252 AC018553.1-201ENST00000616682 1458 ntBASIC17.96■□□□□ 0.47
PRKCAP17252 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.96■□□□□ 0.47
PRKCAP17252 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRKCAP17252 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 AC026366.1-201ENST00000488803 879 ntBASIC17.96■□□□□ 0.47
PRKCAP17252 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.96■□□□□ 0.47
PRKCAP17252 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.96■□□□□ 0.47
PRKCAP17252 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRKCAP17252 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PRKCAP17252 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKCAP17252 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
PRKCAP17252 AC009237.14-201ENST00000609975 1594 ntBASIC17.96■□□□□ 0.46
PRKCAP17252 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKCAP17252 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 TNXA-203ENST00000507684 2038 ntBASIC17.95■□□□□ 0.46
PRKCAP17252 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKCAP17252 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRKCAP17252 POM121L13P-201ENST00000422362 380 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms