Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.44■□□□□ 0.86
PDGFRAP16234 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDGFRAP16234 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PDGFRAP16234 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 KRT18P16-201ENST00000510337 1294 ntBASIC20.43■□□□□ 0.86
PDGFRAP16234 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.43■□□□□ 0.86
PDGFRAP16234 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.43■□□□□ 0.86
PDGFRAP16234 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.43■□□□□ 0.86
PDGFRAP16234 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.43■□□□□ 0.86
PDGFRAP16234 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.43■□□□□ 0.86
PDGFRAP16234 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 AL023875.1-201ENST00000640777 796 ntBASIC20.43■□□□□ 0.86
PDGFRAP16234 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDGFRAP16234 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFRAP16234 NBPF21P-201ENST00000425093 1451 ntBASIC20.43■□□□□ 0.86
PDGFRAP16234 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
PDGFRAP16234 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.42■□□□□ 0.86
PDGFRAP16234 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PDGFRAP16234 TUBB8P6-201ENST00000436895 1288 ntBASIC20.42■□□□□ 0.86
PDGFRAP16234 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.42■□□□□ 0.86
PDGFRAP16234 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PDGFRAP16234 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDGFRAP16234 KRT8P8-201ENST00000434750 1448 ntBASIC20.42■□□□□ 0.86
PDGFRAP16234 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDGFRAP16234 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDGFRAP16234 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.41■□□□□ 0.86
PDGFRAP16234 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.41■□□□□ 0.86
PDGFRAP16234 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.41■□□□□ 0.86
PDGFRAP16234 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
PDGFRAP16234 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.41■□□□□ 0.86
PDGFRAP16234 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
PDGFRAP16234 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDGFRAP16234 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFRAP16234 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFRAP16234 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDGFRAP16234 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFRAP16234 AC239809.2-201ENST00000415381 517 ntBASIC20.4■□□□□ 0.86
PDGFRAP16234 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.4■□□□□ 0.86
PDGFRAP16234 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFRAP16234 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDGFRAP16234 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PDGFRAP16234 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.4■□□□□ 0.86
PDGFRAP16234 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.4■□□□□ 0.86
PDGFRAP16234 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.4■□□□□ 0.86
PDGFRAP16234 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
PDGFRAP16234 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
PDGFRAP16234 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.4■□□□□ 0.86
PDGFRAP16234 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms