Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TCF4P15884 ZNF815P-204ENST00000434898 1737 ntBASIC20.3■□□□□ 0.84
TCF4P15884 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 YBX1P10-201ENST00000444752 975 ntBASIC20.3■□□□□ 0.84
TCF4P15884 AP003097.1-201ENST00000530657 1135 ntBASIC20.3■□□□□ 0.84
TCF4P15884 KRT18P6-201ENST00000555540 1265 ntBASIC20.3■□□□□ 0.84
TCF4P15884 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 SDHAP1-207ENST00000440850 2000 ntBASIC20.3■□□□□ 0.84
TCF4P15884 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.3■□□□□ 0.84
TCF4P15884 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCF4P15884 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.29■□□□□ 0.84
TCF4P15884 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TCF4P15884 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.29■□□□□ 0.84
TCF4P15884 TEX21P-204ENST00000641479 1693 ntBASIC20.29■□□□□ 0.84
TCF4P15884 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.29■□□□□ 0.84
TCF4P15884 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.29■□□□□ 0.84
TCF4P15884 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.29■□□□□ 0.84
TCF4P15884 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.29■□□□□ 0.84
TCF4P15884 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.29■□□□□ 0.84
TCF4P15884 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.29■□□□□ 0.84
TCF4P15884 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.29■□□□□ 0.84
TCF4P15884 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCF4P15884 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
TCF4P15884 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
TCF4P15884 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TCF4P15884 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 KRT18P16-201ENST00000510337 1294 ntBASIC20.28■□□□□ 0.84
TCF4P15884 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.28■□□□□ 0.84
TCF4P15884 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
TCF4P15884 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TCF4P15884 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCF4P15884 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.84
TCF4P15884 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 AC104417.2-201ENST00000562989 1793 ntBASIC20.27■□□□□ 0.84
TCF4P15884 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TCF4P15884 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.27■□□□□ 0.84
TCF4P15884 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.27■□□□□ 0.84
TCF4P15884 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCF4P15884 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCF4P15884 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TCF4P15884 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCF4P15884 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCF4P15884 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
TCF4P15884 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCF4P15884 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCF4P15884 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCF4P15884 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TCF4P15884 LINC01465-201ENST00000408887 1940 ntBASIC20.26■□□□□ 0.83
TCF4P15884 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCF4P15884 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCF4P15884 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TCF4P15884 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.26■□□□□ 0.83
TCF4P15884 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCF4P15884 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TCF4P15884 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TCF4P15884 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.26■□□□□ 0.83
TCF4P15884 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.26■□□□□ 0.83
TCF4P15884 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.26■□□□□ 0.83
TCF4P15884 AC026366.1-201ENST00000488803 879 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms