Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CLTAP09496 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLTAP09496 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CLTAP09496 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.29■■□□□ 1
CLTAP09496 AL596275.1-201ENST00000423464 877 ntBASIC21.29■■□□□ 1
CLTAP09496 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.29■■□□□ 1
CLTAP09496 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.29■■□□□ 1
CLTAP09496 C1QL1P1-201ENST00000568105 661 ntBASIC21.29■■□□□ 1
CLTAP09496 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.29■■□□□ 1
CLTAP09496 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLTAP09496 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.29■■□□□ 1
CLTAP09496 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.29■■□□□ 1
CLTAP09496 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLTAP09496 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLTAP09496 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.28■■□□□ 1
CLTAP09496 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.28■■□□□ 1
CLTAP09496 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.28■■□□□ 1
CLTAP09496 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLTAP09496 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.28■■□□□ 1
CLTAP09496 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.28■■□□□ 1
CLTAP09496 AP002982.1-201ENST00000492365 877 ntBASIC21.28■■□□□ 1
CLTAP09496 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.28■■□□□ 1
CLTAP09496 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.28■■□□□ 1
CLTAP09496 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
CLTAP09496 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.28■■□□□ 1
CLTAP09496 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLTAP09496 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.27■■□□□ 1
CLTAP09496 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.27■■□□□ 1
CLTAP09496 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLTAP09496 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.27■■□□□ 1
CLTAP09496 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.27■■□□□ 1
CLTAP09496 AC073195.1-201ENST00000607241 877 ntBASIC21.27■■□□□ 1
CLTAP09496 AC113410.3-201ENST00000623366 203 ntBASIC21.27■■□□□ 1
CLTAP09496 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.27■■□□□ 1
CLTAP09496 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLTAP09496 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLTAP09496 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLTAP09496 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CLTAP09496 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.27■□□□□ 0.99
CLTAP09496 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.26■□□□□ 0.99
CLTAP09496 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLTAP09496 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLTAP09496 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLTAP09496 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLTAP09496 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLTAP09496 MIR4497-201ENST00000583208 89 ntBASIC21.26■□□□□ 0.99
CLTAP09496 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.26■□□□□ 0.99
CLTAP09496 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLTAP09496 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLTAP09496 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.26■□□□□ 0.99
CLTAP09496 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLTAP09496 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
CLTAP09496 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLTAP09496 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLTAP09496 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.25■□□□□ 0.99
CLTAP09496 NIFKP9-201ENST00000419265 221 ntBASIC21.25■□□□□ 0.99
CLTAP09496 SNORA78-201ENST00000459373 127 ntBASIC21.25■□□□□ 0.99
CLTAP09496 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.25■□□□□ 0.99
CLTAP09496 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.25■□□□□ 0.99
CLTAP09496 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms