Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC1P07992 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC1P07992 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
ERCC1P07992 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC1P07992 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC1P07992 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC1P07992 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC1P07992 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 AL158047.1-201ENST00000445918 881 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.23■□□□□ 0.35
ERCC1P07992 AC142381.4-202ENST00000563973 229 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 AC008687.6-201ENST00000596318 630 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 AC066615.1-201ENST00000640911 628 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 AC073648.6-201ENST00000641589 218 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC1P07992 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC1P07992 AC009237.14-201ENST00000609975 1594 ntBASIC17.23■□□□□ 0.35
ERCC1P07992 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC1P07992 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ERCC1P07992 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC1P07992 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ERCC1P07992 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 AC090340.1-201ENST00000620778 4980 ntBASIC17.22■□□□□ 0.35
ERCC1P07992 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ERCC1P07992 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ERCC1P07992 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC1P07992 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC1P07992 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC1P07992 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC1P07992 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ERCC1P07992 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC1P07992 FAM197Y4-202ENST00000622692 608 ntBASIC17.22■□□□□ 0.35
ERCC1P07992 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC1P07992 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ERCC1P07992 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC1P07992 KRT16P6-202ENST00000425692 1426 ntBASIC17.21■□□□□ 0.35
ERCC1P07992 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC1P07992 TREX1-205ENST00000625293 1783 ntBASIC17.21■□□□□ 0.35
ERCC1P07992 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ERCC1P07992 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ERCC1P07992 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.21■□□□□ 0.35
ERCC1P07992 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ERCC1P07992 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 AC005332.7-201ENST00000614046 2005 ntBASIC17.21■□□□□ 0.35
ERCC1P07992 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC1P07992 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ERCC1P07992 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ERCC1P07992 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms