Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 AL138966.2-201ENST00000621997 464 ntBASIC19.65■□□□□ 0.74
RETP07949 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.65■□□□□ 0.74
RETP07949 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RETP07949 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RETP07949 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RETP07949 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RETP07949 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.64■□□□□ 0.74
RETP07949 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RETP07949 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.64■□□□□ 0.73
RETP07949 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
RETP07949 C1QL1P1-201ENST00000568105 661 ntBASIC19.64■□□□□ 0.73
RETP07949 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.64■□□□□ 0.73
RETP07949 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RETP07949 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
RETP07949 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RETP07949 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.64■□□□□ 0.73
RETP07949 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.63■□□□□ 0.73
RETP07949 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
RETP07949 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.63■□□□□ 0.73
RETP07949 KRT8P36-201ENST00000489121 1440 ntBASIC19.63■□□□□ 0.73
RETP07949 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.63■□□□□ 0.73
RETP07949 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.63■□□□□ 0.73
RETP07949 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 IER3-202ENST00000376377 1350 ntBASIC19.63■□□□□ 0.73
RETP07949 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RETP07949 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
RETP07949 AC011506.1-201ENST00000474329 610 ntBASIC19.63■□□□□ 0.73
RETP07949 COX11P1-201ENST00000489116 835 ntBASIC19.63■□□□□ 0.73
RETP07949 FAM86EP-206ENST00000510506 987 ntBASIC19.63■□□□□ 0.73
RETP07949 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.63■□□□□ 0.73
RETP07949 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
RETP07949 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RETP07949 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RETP07949 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RETP07949 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RETP07949 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.62■□□□□ 0.73
RETP07949 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RETP07949 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.62■□□□□ 0.73
RETP07949 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RETP07949 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.62■□□□□ 0.73
RETP07949 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RETP07949 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.62■□□□□ 0.73
RETP07949 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.62■□□□□ 0.73
RETP07949 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.62■□□□□ 0.73
RETP07949 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.62■□□□□ 0.73
RETP07949 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.62■□□□□ 0.73
RETP07949 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.62■□□□□ 0.73
RETP07949 AC093458.2-201ENST00000623150 629 ntBASIC19.62■□□□□ 0.73
RETP07949 AC116562.4-202ENST00000641738 218 ntBASIC19.62■□□□□ 0.73
RETP07949 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.62■□□□□ 0.73
RETP07949 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
RETP07949 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RETP07949 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RETP07949 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RETP07949 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.61■□□□□ 0.73
RETP07949 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.61■□□□□ 0.73
RETP07949 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.61■□□□□ 0.73
RETP07949 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RETP07949 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RETP07949 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RETP07949 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RETP07949 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.6■□□□□ 0.73
RETP07949 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.6■□□□□ 0.73
RETP07949 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms