Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN1P07384 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CAPN1P07384 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CAPN1P07384 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN1P07384 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN1P07384 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN1P07384 RPS2P4-201ENST00000476944 856 ntBASIC19.12■□□□□ 0.65
CAPN1P07384 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.12■□□□□ 0.65
CAPN1P07384 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN1P07384 C1QBPP2-201ENST00000528754 825 ntBASIC19.12■□□□□ 0.65
CAPN1P07384 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 AC005829.2-201ENST00000571422 1056 ntBASIC19.12■□□□□ 0.65
CAPN1P07384 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.12■□□□□ 0.65
CAPN1P07384 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN1P07384 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CAPN1P07384 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN1P07384 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN1P07384 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN1P07384 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CAPN1P07384 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CAPN1P07384 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPN1P07384 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 AC008550.1-201ENST00000511500 884 ntBASIC19.11■□□□□ 0.65
CAPN1P07384 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPN1P07384 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN1P07384 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CAPN1P07384 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN1P07384 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CAPN1P07384 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN1P07384 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 AC120498.8-201ENST00000614275 531 ntBASIC19.1■□□□□ 0.65
CAPN1P07384 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPN1P07384 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN1P07384 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN1P07384 AC018445.3-201ENST00000624177 1945 ntBASIC19.1■□□□□ 0.65
CAPN1P07384 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms