Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 TERF1P1-201ENST00000311003 1181 ntBASIC21.37■■□□□ 1.01
VTNP04004 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 INGX-201ENST00000359239 846 ntBASIC21.37■■□□□ 1.01
VTNP04004 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 MFAP1P1-201ENST00000442257 1255 ntBASIC21.37■■□□□ 1.01
VTNP04004 ECEL1P2-202ENST00000465689 757 ntBASIC21.37■■□□□ 1.01
VTNP04004 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.37■■□□□ 1.01
VTNP04004 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 TCF3P1-201ENST00000423021 1937 ntBASIC21.37■■□□□ 1.01
VTNP04004 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.37■■□□□ 1.01
VTNP04004 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.37■■□□□ 1.01
VTNP04004 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VTNP04004 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.36■■□□□ 1.01
VTNP04004 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.36■■□□□ 1.01
VTNP04004 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
VTNP04004 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.36■■□□□ 1.01
VTNP04004 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VTNP04004 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.35■■□□□ 1.01
VTNP04004 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VTNP04004 TSPY14P-201ENST00000303979 915 ntBASIC21.35■■□□□ 1.01
VTNP04004 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VTNP04004 AL137013.1-201ENST00000432946 1228 ntBASIC21.35■■□□□ 1.01
VTNP04004 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 EGLN1P1-201ENST00000531623 762 ntBASIC21.35■■□□□ 1.01
VTNP04004 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.35■■□□□ 1.01
VTNP04004 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.35■■□□□ 1.01
VTNP04004 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
VTNP04004 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
VTNP04004 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VTNP04004 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VTNP04004 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VTNP04004 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VTNP04004 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.34■■□□□ 1.01
VTNP04004 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VTNP04004 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.34■■□□□ 1.01
VTNP04004 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.34■■□□□ 1.01
VTNP04004 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.34■■□□□ 1.01
VTNP04004 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 AC096733.2-201ENST00000609937 1394 ntBASIC21.34■■□□□ 1.01
VTNP04004 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.34■■□□□ 1.01
VTNP04004 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VTNP04004 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.33■■□□□ 1.01
VTNP04004 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 AC010203.1-204ENST00000548782 407 ntBASIC21.33■■□□□ 1.01
VTNP04004 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VTNP04004 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.33■■□□□ 1
VTNP04004 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.33■■□□□ 1
VTNP04004 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.33■■□□□ 1
VTNP04004 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.32■■□□□ 1
VTNP04004 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 AC073508.3-201ENST00000619697 1419 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms