Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-ND3P03897 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
MT-ND3P03897 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MT-ND3P03897 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 KRT8P20-201ENST00000423953 1409 ntBASIC19.79■□□□□ 0.76
MT-ND3P03897 AC010980.2-201ENST00000587099 1412 ntBASIC19.79■□□□□ 0.76
MT-ND3P03897 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.79■□□□□ 0.76
MT-ND3P03897 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MT-ND3P03897 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MT-ND3P03897 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MT-ND3P03897 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND3P03897 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MT-ND3P03897 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.78■□□□□ 0.76
MT-ND3P03897 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 RNA5SP413-201ENST00000516373 109 ntBASIC19.78■□□□□ 0.76
MT-ND3P03897 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND3P03897 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.78■□□□□ 0.76
MT-ND3P03897 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.78■□□□□ 0.76
MT-ND3P03897 MIR4651-201ENST00000582622 73 ntBASIC19.78■□□□□ 0.76
MT-ND3P03897 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.78■□□□□ 0.76
MT-ND3P03897 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND3P03897 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.77■□□□□ 0.76
MT-ND3P03897 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MT-ND3P03897 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MT-ND3P03897 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MT-ND3P03897 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
MT-ND3P03897 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.77■□□□□ 0.76
MT-ND3P03897 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
MT-ND3P03897 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.77■□□□□ 0.76
MT-ND3P03897 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.77■□□□□ 0.76
MT-ND3P03897 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND3P03897 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
MT-ND3P03897 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
MT-ND3P03897 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
MT-ND3P03897 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.77■□□□□ 0.75
MT-ND3P03897 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
MT-ND3P03897 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MT-ND3P03897 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MT-ND3P03897 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
MT-ND3P03897 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
MT-ND3P03897 POU5F1P3-201ENST00000428824 1078 ntBASIC19.76■□□□□ 0.75
MT-ND3P03897 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms