Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 GPX1P2-201ENST00000429271 606 ntBASIC8.72□□□□□ -1.01
USH2AO75445 LHX6-205ENST00000464484 666 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC8.72□□□□□ -1.01
USH2AO75445 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC8.72□□□□□ -1.01
USH2AO75445 AC012615.1-201ENST00000565797 1299 ntBASIC8.72□□□□□ -1.01
USH2AO75445 RPS15-207ENST00000591032 550 ntTSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 PUDP-206ENST00000540122 825 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC8.72□□□□□ -1.01
USH2AO75445 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC8.72□□□□□ -1.01
USH2AO75445 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 MOK-208ENST00000519058 917 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 SART3-203ENST00000546611 1184 ntBASIC8.72□□□□□ -1.01
USH2AO75445 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
USH2AO75445 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 RPL18-209ENST00000550645 463 ntTSL 5 BASIC8.72□□□□□ -1.01
USH2AO75445 RPL18-214ENST00000552588 559 ntTSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC8.72□□□□□ -1.01
USH2AO75445 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC8.72□□□□□ -1.01
USH2AO75445 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USH2AO75445 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC8.71□□□□□ -1.01
USH2AO75445 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC8.71□□□□□ -1.01
USH2AO75445 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.01
USH2AO75445 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC8.71□□□□□ -1.01
USH2AO75445 AF238378.1-201ENST00000526806 358 ntBASIC8.71□□□□□ -1.01
USH2AO75445 RFPL4AP1-201ENST00000530883 850 ntBASIC8.71□□□□□ -1.01
USH2AO75445 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC8.71□□□□□ -1.01
USH2AO75445 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC8.71□□□□□ -1.01
USH2AO75445 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
USH2AO75445 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
USH2AO75445 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC8.71□□□□□ -1.01
USH2AO75445 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.01
USH2AO75445 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC8.71□□□□□ -1.01
USH2AO75445 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
USH2AO75445 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
USH2AO75445 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC8.71□□□□□ -1.01
USH2AO75445 AL121603.2-201ENST00000557373 2117 ntBASIC8.71□□□□□ -1.02
USH2AO75445 FAM99A-202ENST00000538190 1989 ntBASIC8.71□□□□□ -1.02
USH2AO75445 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 BX276092.5-203ENST00000456199 560 ntBASIC8.71□□□□□ -1.02
USH2AO75445 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC8.71□□□□□ -1.02
USH2AO75445 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC8.71□□□□□ -1.02
USH2AO75445 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC8.71□□□□□ -1.02
USH2AO75445 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 LSM5-204ENST00000409909 740 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC8.71□□□□□ -1.02
USH2AO75445 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.71□□□□□ -1.02
USH2AO75445 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 AL353801.3-201ENST00000609898 542 ntBASIC8.71□□□□□ -1.02
USH2AO75445 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USH2AO75445 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC8.71□□□□□ -1.02
USH2AO75445 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
USH2AO75445 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms