Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.01■■□□□ 1.59
PTCD1O75127 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD1O75127 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.01■■□□□ 1.59
PTCD1O75127 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD1O75127 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.01■■□□□ 1.59
PTCD1O75127 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.01■■□□□ 1.59
PTCD1O75127 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
PTCD1O75127 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.01■■□□□ 1.59
PTCD1O75127 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.01■■□□□ 1.59
PTCD1O75127 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
PTCD1O75127 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.01■■□□□ 1.59
PTCD1O75127 AP001271.2-201ENST00000624018 1556 ntBASIC25.01■■□□□ 1.59
PTCD1O75127 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD1O75127 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD1O75127 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.01■■□□□ 1.59
PTCD1O75127 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 NME1-207ENST00000480143 964 ntTSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25■■□□□ 1.59
PTCD1O75127 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25■■□□□ 1.59
PTCD1O75127 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25■■□□□ 1.59
PTCD1O75127 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD1O75127 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.99■■□□□ 1.59
PTCD1O75127 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.99■■□□□ 1.59
PTCD1O75127 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.99■■□□□ 1.59
PTCD1O75127 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.99■■□□□ 1.59
PTCD1O75127 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PTCD1O75127 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PTCD1O75127 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.99■■□□□ 1.59
PTCD1O75127 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.98■■□□□ 1.59
PTCD1O75127 AC020907.5-201ENST00000624372 1936 ntBASIC24.98■■□□□ 1.59
PTCD1O75127 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 KRT8P41-201ENST00000533985 1514 ntBASIC24.98■■□□□ 1.59
PTCD1O75127 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.98■■□□□ 1.59
PTCD1O75127 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD1O75127 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.98■■□□□ 1.59
PTCD1O75127 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.98■■□□□ 1.59
PTCD1O75127 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.98■■□□□ 1.59
PTCD1O75127 AL023973.1-201ENST00000624619 620 ntBASIC24.98■■□□□ 1.59
PTCD1O75127 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PTCD1O75127 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.97■■□□□ 1.59
PTCD1O75127 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.97■■□□□ 1.59
PTCD1O75127 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
PTCD1O75127 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.97■■□□□ 1.59
PTCD1O75127 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.97■■□□□ 1.59
PTCD1O75127 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.97■■□□□ 1.59
PTCD1O75127 AP003041.3-201ENST00000527151 707 ntBASIC24.97■■□□□ 1.59
PTCD1O75127 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.97■■□□□ 1.59
PTCD1O75127 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.97■■□□□ 1.59
PTCD1O75127 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PTCD1O75127 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.97■■□□□ 1.59
PTCD1O75127 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD1O75127 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.96■■□□□ 1.59
PTCD1O75127 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.96■■□□□ 1.59
PTCD1O75127 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 AL359075.1-203ENST00000462729 1002 ntBASIC24.96■■□□□ 1.59
PTCD1O75127 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
PTCD1O75127 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCD1O75127 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCD1O75127 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCD1O75127 CKBP1-201ENST00000565489 1086 ntBASIC24.96■■□□□ 1.59
PTCD1O75127 AL441883.1-201ENST00000566170 1045 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms