Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GFRA3O60609 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.98■□□□□ 0.63
GFRA3O60609 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.98■□□□□ 0.63
GFRA3O60609 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.97■□□□□ 0.63
GFRA3O60609 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.97■□□□□ 0.63
GFRA3O60609 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
GFRA3O60609 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.97■□□□□ 0.63
GFRA3O60609 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.97■□□□□ 0.63
GFRA3O60609 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.97■□□□□ 0.63
GFRA3O60609 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
GFRA3O60609 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA3O60609 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.96■□□□□ 0.63
GFRA3O60609 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 AL031284.1-201ENST00000419297 478 ntBASIC18.96■□□□□ 0.63
GFRA3O60609 TP73-AS1-207ENST00000624167 988 ntBASIC18.96■□□□□ 0.63
GFRA3O60609 AC083906.6-201ENST00000641366 219 ntBASIC18.96■□□□□ 0.63
GFRA3O60609 AC079781.4-201ENST00000641908 219 ntBASIC18.96■□□□□ 0.63
GFRA3O60609 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 KRT8P17-201ENST00000453110 1448 ntBASIC18.96■□□□□ 0.63
GFRA3O60609 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.96■□□□□ 0.63
GFRA3O60609 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA3O60609 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
GFRA3O60609 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.95■□□□□ 0.62
GFRA3O60609 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.95■□□□□ 0.62
GFRA3O60609 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
GFRA3O60609 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GFRA3O60609 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA3O60609 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA3O60609 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 UPF3AP3-201ENST00000420996 769 ntBASIC18.94■□□□□ 0.62
GFRA3O60609 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 AC074051.2-201ENST00000565115 352 ntBASIC18.94■□□□□ 0.62
GFRA3O60609 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 AC099336.1-202ENST00000602961 463 ntBASIC18.94■□□□□ 0.62
GFRA3O60609 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
GFRA3O60609 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA3O60609 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
GFRA3O60609 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA3O60609 ZNF259P1-201ENST00000407656 1365 ntBASIC18.93■□□□□ 0.62
GFRA3O60609 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GFRA3O60609 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GFRA3O60609 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.93■□□□□ 0.62
GFRA3O60609 AC018553.1-201ENST00000616682 1458 ntBASIC18.93■□□□□ 0.62
GFRA3O60609 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms