Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZIC3O60481 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
ZIC3O60481 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZIC3O60481 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.56■□□□□ 0.4
ZIC3O60481 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.56■□□□□ 0.4
ZIC3O60481 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.56■□□□□ 0.4
ZIC3O60481 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.56■□□□□ 0.4
ZIC3O60481 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZIC3O60481 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZIC3O60481 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZIC3O60481 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZIC3O60481 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.56■□□□□ 0.4
ZIC3O60481 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZIC3O60481 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
ZIC3O60481 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
ZIC3O60481 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
ZIC3O60481 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.55■□□□□ 0.4
ZIC3O60481 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 TSPY15P-201ENST00000457163 923 ntBASIC17.55■□□□□ 0.4
ZIC3O60481 AC116562.2-201ENST00000507042 360 ntBASIC17.55■□□□□ 0.4
ZIC3O60481 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.55■□□□□ 0.4
ZIC3O60481 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.55■□□□□ 0.4
ZIC3O60481 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.55■□□□□ 0.4
ZIC3O60481 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZIC3O60481 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZIC3O60481 LINC01465-201ENST00000408887 1940 ntBASIC17.55■□□□□ 0.4
ZIC3O60481 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.54■□□□□ 0.4
ZIC3O60481 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.54■□□□□ 0.4
ZIC3O60481 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.54■□□□□ 0.4
ZIC3O60481 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.54■□□□□ 0.4
ZIC3O60481 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.54■□□□□ 0.4
ZIC3O60481 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 AFG3L1P-217ENST00000557444 2447 ntBASIC17.54■□□□□ 0.4
ZIC3O60481 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZIC3O60481 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.54■□□□□ 0.4
ZIC3O60481 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZIC3O60481 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.54■□□□□ 0.4
ZIC3O60481 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.54■□□□□ 0.4
ZIC3O60481 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZIC3O60481 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.54■□□□□ 0.4
ZIC3O60481 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.53■□□□□ 0.4
ZIC3O60481 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.53■□□□□ 0.4
ZIC3O60481 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.53■□□□□ 0.4
ZIC3O60481 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.53■□□□□ 0.4
ZIC3O60481 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.53■□□□□ 0.4
ZIC3O60481 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
ZIC3O60481 AL355075.4-201ENST00000554988 638 ntBASIC17.53■□□□□ 0.4
ZIC3O60481 AL160286.2-201ENST00000567150 934 ntBASIC17.53■□□□□ 0.4
ZIC3O60481 AC026271.3-201ENST00000571884 352 ntBASIC17.53■□□□□ 0.4
ZIC3O60481 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.53■□□□□ 0.4
ZIC3O60481 REXO1L10P-201ENST00000615707 1290 ntBASIC17.53■□□□□ 0.4
ZIC3O60481 REXO1L12P-201ENST00000622156 912 ntBASIC17.53■□□□□ 0.4
ZIC3O60481 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.53■□□□□ 0.4
ZIC3O60481 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms