Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.64■□□□□ 0.57
LCMT2O60294 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LCMT2O60294 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.63■□□□□ 0.57
LCMT2O60294 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LCMT2O60294 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LCMT2O60294 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LCMT2O60294 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LCMT2O60294 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 UBE2SP1-201ENST00000450587 669 ntBASIC18.63■□□□□ 0.57
LCMT2O60294 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.63■□□□□ 0.57
LCMT2O60294 C1QL1P1-201ENST00000568105 661 ntBASIC18.63■□□□□ 0.57
LCMT2O60294 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCMT2O60294 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LCMT2O60294 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LCMT2O60294 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LCMT2O60294 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.62■□□□□ 0.57
LCMT2O60294 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.62■□□□□ 0.57
LCMT2O60294 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.62■□□□□ 0.57
LCMT2O60294 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LCMT2O60294 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.62■□□□□ 0.57
LCMT2O60294 HTR7P1-201ENST00000538670 1336 ntBASIC18.62■□□□□ 0.57
LCMT2O60294 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.62■□□□□ 0.57
LCMT2O60294 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
LCMT2O60294 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
LCMT2O60294 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCMT2O60294 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.61■□□□□ 0.57
LCMT2O60294 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.61■□□□□ 0.57
LCMT2O60294 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.61■□□□□ 0.57
LCMT2O60294 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.61■□□□□ 0.57
LCMT2O60294 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.61■□□□□ 0.57
LCMT2O60294 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.61■□□□□ 0.57
LCMT2O60294 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.61■□□□□ 0.57
LCMT2O60294 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCMT2O60294 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LCMT2O60294 Z82202.1-201ENST00000623446 1880 ntBASIC18.6■□□□□ 0.57
LCMT2O60294 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.6■□□□□ 0.57
LCMT2O60294 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LCMT2O60294 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 AC007952.6-201ENST00000573168 2673 ntBASIC18.6■□□□□ 0.57
LCMT2O60294 AC003957.1-201ENST00000625108 2673 ntBASIC18.6■□□□□ 0.57
LCMT2O60294 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms