Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
XRCC2O43543 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC2O43543 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.9■□□□□ 0.3
XRCC2O43543 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC2O43543 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.9■□□□□ 0.3
XRCC2O43543 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC2O43543 UNC93B4-201ENST00000505679 747 ntBASIC16.9■□□□□ 0.3
XRCC2O43543 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.9■□□□□ 0.3
XRCC2O43543 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.9■□□□□ 0.3
XRCC2O43543 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC2O43543 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
XRCC2O43543 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC2O43543 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC2O43543 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.9■□□□□ 0.3
XRCC2O43543 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC2O43543 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.89■□□□□ 0.3
XRCC2O43543 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
XRCC2O43543 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC2O43543 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 AC005332.7-201ENST00000614046 2005 ntBASIC16.89■□□□□ 0.29
XRCC2O43543 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC2O43543 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XRCC2O43543 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XRCC2O43543 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.89■□□□□ 0.29
XRCC2O43543 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC2O43543 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
XRCC2O43543 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
XRCC2O43543 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
XRCC2O43543 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC2O43543 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.88■□□□□ 0.29
XRCC2O43543 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC2O43543 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC2O43543 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.88■□□□□ 0.29
XRCC2O43543 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC2O43543 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
XRCC2O43543 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
XRCC2O43543 UNC93B5-201ENST00000530315 699 ntBASIC16.88■□□□□ 0.29
XRCC2O43543 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
XRCC2O43543 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
XRCC2O43543 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.88■□□□□ 0.29
XRCC2O43543 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
XRCC2O43543 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC2O43543 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC2O43543 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
XRCC2O43543 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms