Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MSH5O43196 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MSH5O43196 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
MSH5O43196 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 PFN2-202ENST00000423691 911 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.27■■□□□ 1.8
MSH5O43196 RARRES2P10-201ENST00000564312 460 ntBASIC26.27■■□□□ 1.8
MSH5O43196 AC026471.5-201ENST00000615068 467 ntBASIC26.27■■□□□ 1.8
MSH5O43196 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 AC092964.1-201ENST00000623304 1399 ntBASIC26.27■■□□□ 1.8
MSH5O43196 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.27■■□□□ 1.8
MSH5O43196 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.27■■□□□ 1.8
MSH5O43196 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.27■■□□□ 1.8
MSH5O43196 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 AC112907.3-201ENST00000577781 2400 ntBASIC26.27■■□□□ 1.8
MSH5O43196 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MSH5O43196 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.26■■□□□ 1.79
MSH5O43196 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.26■■□□□ 1.79
MSH5O43196 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.26■■□□□ 1.79
MSH5O43196 ZNF92P2-201ENST00000600543 1059 ntBASIC26.26■■□□□ 1.79
MSH5O43196 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC26.26■■□□□ 1.79
MSH5O43196 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MSH5O43196 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
MSH5O43196 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC26.26■■□□□ 1.79
MSH5O43196 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
MSH5O43196 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC26.25■■□□□ 1.79
MSH5O43196 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.25■■□□□ 1.79
MSH5O43196 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 MMP23A-201ENST00000234610 1017 ntBASIC26.25■■□□□ 1.79
MSH5O43196 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
MSH5O43196 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC26.25■■□□□ 1.79
MSH5O43196 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
MSH5O43196 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.25■■□□□ 1.79
MSH5O43196 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.25■■□□□ 1.79
MSH5O43196 AP003071.4-201ENST00000562276 1284 ntBASIC26.25■■□□□ 1.79
MSH5O43196 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
MSH5O43196 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.25■■□□□ 1.79
MSH5O43196 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
MSH5O43196 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
MSH5O43196 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
MSH5O43196 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.25■■□□□ 1.79
MSH5O43196 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.25■■□□□ 1.79
MSH5O43196 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
MSH5O43196 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
MSH5O43196 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
MSH5O43196 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC26.24■■□□□ 1.79
MSH5O43196 AC013469.1-201ENST00000426985 403 ntBASIC26.24■■□□□ 1.79
MSH5O43196 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.24■■□□□ 1.79
MSH5O43196 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
MSH5O43196 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.24■■□□□ 1.79
MSH5O43196 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
MSH5O43196 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
MSH5O43196 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.24■■□□□ 1.79
MSH5O43196 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.24■■□□□ 1.79
MSH5O43196 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.24■■□□□ 1.79
MSH5O43196 AC090506.2-201ENST00000624521 419 ntBASIC26.24■■□□□ 1.79
MSH5O43196 BX323043.1-201ENST00000641006 1765 ntBASIC26.24■■□□□ 1.79
MSH5O43196 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSH5O43196 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
MSH5O43196 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MSH5O43196 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
MSH5O43196 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MSH5O43196 AC004408.2-201ENST00000623613 2777 ntBASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms