Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF113AO15541 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF113AO15541 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF113AO15541 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RNF113AO15541 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.41■■□□□ 1.34
RNF113AO15541 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF113AO15541 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RNF113AO15541 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RNF113AO15541 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.41■■□□□ 1.34
RNF113AO15541 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF113AO15541 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF113AO15541 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF113AO15541 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF113AO15541 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
RNF113AO15541 FAM197Y1-201ENST00000421178 764 ntBASIC23.4■■□□□ 1.34
RNF113AO15541 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF113AO15541 CD177P1-201ENST00000606252 935 ntBASIC23.4■■□□□ 1.34
RNF113AO15541 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.4■■□□□ 1.34
RNF113AO15541 CR392000.1-201ENST00000624770 1228 ntBASIC23.4■■□□□ 1.34
RNF113AO15541 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF113AO15541 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
RNF113AO15541 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF113AO15541 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF113AO15541 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.39■■□□□ 1.34
RNF113AO15541 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF113AO15541 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.39■■□□□ 1.34
RNF113AO15541 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.39■■□□□ 1.34
RNF113AO15541 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF113AO15541 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.39■■□□□ 1.34
RNF113AO15541 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF113AO15541 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 LINC01465-201ENST00000408887 1940 ntBASIC23.39■■□□□ 1.33
RNF113AO15541 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF113AO15541 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF113AO15541 ZNF815P-204ENST00000434898 1737 ntBASIC23.39■■□□□ 1.33
RNF113AO15541 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF113AO15541 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.38■■□□□ 1.33
RNF113AO15541 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF113AO15541 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 KRT16P1-201ENST00000399124 1418 ntBASIC23.38■■□□□ 1.33
RNF113AO15541 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF113AO15541 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF113AO15541 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF113AO15541 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
RNF113AO15541 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RNF113AO15541 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF113AO15541 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF113AO15541 AC004980.1-204ENST00000429707 299 ntBASIC23.37■■□□□ 1.33
RNF113AO15541 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.37■■□□□ 1.33
RNF113AO15541 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RNF113AO15541 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF113AO15541 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF113AO15541 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF113AO15541 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF113AO15541 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RNF113AO15541 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF113AO15541 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF113AO15541 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF113AO15541 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF113AO15541 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF113AO15541 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms