Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTLC1O15269 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC1O15269 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTLC1O15269 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC1O15269 RBM17P1-201ENST00000453646 1190 ntBASIC20.87■□□□□ 0.93
SPTLC1O15269 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.87■□□□□ 0.93
SPTLC1O15269 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC1O15269 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTLC1O15269 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTLC1O15269 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPTLC1O15269 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPTLC1O15269 AC079598.2-202ENST00000546624 1451 ntBASIC20.87■□□□□ 0.93
SPTLC1O15269 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC1O15269 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC1O15269 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 LINC01465-201ENST00000408887 1940 ntBASIC20.86■□□□□ 0.93
SPTLC1O15269 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.86■□□□□ 0.93
SPTLC1O15269 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.86■□□□□ 0.93
SPTLC1O15269 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPTLC1O15269 AC011506.1-201ENST00000474329 610 ntBASIC20.86■□□□□ 0.93
SPTLC1O15269 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.86■□□□□ 0.93
SPTLC1O15269 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 AC012306.2-201ENST00000609350 630 ntBASIC20.86■□□□□ 0.93
SPTLC1O15269 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.86■□□□□ 0.93
SPTLC1O15269 AL031985.4-201ENST00000642138 673 ntBASIC20.86■□□□□ 0.93
SPTLC1O15269 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SPTLC1O15269 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC1O15269 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC1O15269 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC1O15269 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTLC1O15269 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SPTLC1O15269 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.85■□□□□ 0.93
SPTLC1O15269 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTLC1O15269 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
SPTLC1O15269 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.85■□□□□ 0.93
SPTLC1O15269 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTLC1O15269 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SPTLC1O15269 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC1O15269 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPTLC1O15269 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.84■□□□□ 0.93
SPTLC1O15269 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 AP000525.1-201ENST00000608286 694 ntBASIC20.84■□□□□ 0.93
SPTLC1O15269 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC1O15269 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC1O15269 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC1O15269 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC1O15269 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC1O15269 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC1O15269 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC1O15269 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC1O15269 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SPTLC1O15269 B3GAT3P1-201ENST00000471720 806 ntBASIC20.83■□□□□ 0.93
SPTLC1O15269 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC1O15269 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC1O15269 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SPTLC1O15269 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.83■□□□□ 0.93
SPTLC1O15269 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.83■□□□□ 0.93
SPTLC1O15269 AC026271.3-201ENST00000571884 352 ntBASIC20.83■□□□□ 0.93
SPTLC1O15269 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.83■□□□□ 0.93
SPTLC1O15269 KRT8P9-201ENST00000558927 1449 ntBASIC20.83■□□□□ 0.93
SPTLC1O15269 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC1O15269 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.83■□□□□ 0.92
SPTLC1O15269 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.83■□□□□ 0.92
SPTLC1O15269 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.83■□□□□ 0.92
SPTLC1O15269 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC1O15269 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC1O15269 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SPTLC1O15269 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms