Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.83■□□□□ 0.6
CDX4O14627 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDX4O14627 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CDX4O14627 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDX4O14627 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.82■□□□□ 0.6
CDX4O14627 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.82■□□□□ 0.6
CDX4O14627 HBZP1-201ENST00000354915 429 ntBASIC18.82■□□□□ 0.6
CDX4O14627 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.82■□□□□ 0.6
CDX4O14627 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDX4O14627 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.82■□□□□ 0.6
CDX4O14627 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.82■□□□□ 0.6
CDX4O14627 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDX4O14627 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.82■□□□□ 0.6
CDX4O14627 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDX4O14627 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
CDX4O14627 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.81■□□□□ 0.6
CDX4O14627 FAAHP1-202ENST00000446499 1238 ntBASIC18.81■□□□□ 0.6
CDX4O14627 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CDX4O14627 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.81■□□□□ 0.6
CDX4O14627 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
CDX4O14627 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDX4O14627 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 AL645929.1-201ENST00000420084 975 ntBASIC18.8■□□□□ 0.6
CDX4O14627 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 GPALPP1-207ENST00000611650 899 ntBASIC18.8■□□□□ 0.6
CDX4O14627 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
CDX4O14627 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDX4O14627 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDX4O14627 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDX4O14627 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDX4O14627 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDX4O14627 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.79■□□□□ 0.6
CDX4O14627 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.79■□□□□ 0.6
CDX4O14627 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.79■□□□□ 0.6
CDX4O14627 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDX4O14627 MIR3180-1-201ENST00000580374 94 ntBASIC18.79■□□□□ 0.6
CDX4O14627 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.79■□□□□ 0.6
CDX4O14627 MIR3180-3-201ENST00000584616 94 ntBASIC18.79■□□□□ 0.6
CDX4O14627 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.79■□□□□ 0.6
CDX4O14627 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDX4O14627 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDX4O14627 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.79■□□□□ 0.6
CDX4O14627 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.79■□□□□ 0.6
CDX4O14627 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms